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What is Agency? A View from Autonomy Theory
Louis Virenque, Matteo Mossio
T o cite this version:
Louis Virenque, Matteo Mossio. What is Agency? A View from Autonomy Theory . Biological Theory ,
2023, ￿10.1007/s13752-023-00441-5￿. ￿hal-04153322￿

 1 
 
What is Agency? A View from Autonomy Theory 
To appear in Biological Theory 
The final publication is available at Springer via: 
https://doi.org/10.1007/s13752-023-00441-5 
 
Louis Virenque1 
ORCID : 0009-0007-1194-716X 
 
Matteo Mossio1* 
ORCID : 0000-0003-0831-0815 
 
1IHPST, CNRS/Université Paris 1, Paris, France 
*corresponding author: Matteo.Mossio@univ-paris1.fr 
 
 
Abstract 
The theory of biological autonomy provides a natura lized characterization of agency, understood as 
a general biological phenomenon that extends beyond the domain of intentionality and causation by 
mental states. Agency refers to the capacity of autonomous living beings (roughly speaking: 
organisms) to purp osively and functionally control the interactions with the environment, and to 
adaptively modulate their own self-determining organization and behavior so as to maintain their own 
existence, construed as their intrinsic telos. We mention some crucial strengths of the autonomist 
conception of agency, and some interesting challenges that it faces. Among the latter, we focus on the 
intertwined relationships between agency and evolution, as well as on the transition between agency 
and cognition. 
 
Keywords 
Adaptivity; Agency; Autonomy; Autopoiesis; Cognition; Evolution; Purposiveness 

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Introduction 
 
 In the mainstream conception, the notion of agency is related to intentionality. Action is 
intentional behavior, which means behavior performed for a rea son, oriented toward a goal. A 
behavior, in turn, can be said to be performed for a reason only if it is caused by certain mental states 
(as desires and beliefs) that have a representational content related to the goal and the means to attain 
it (Schlosser 2019). In such a conception, agency is usually attributed to a very specific class of living 
systems, namely human beings ( Frankfurt 1978; Davidson 1982). Yet linking agency to the mind is 
not the only possible stance; living beings at large can also be characterized as agents by relying on 
a more general (and yet naturalized) understanding of purposiveness. The theory of biological 
autonomy provides such a characterization. In a nutshell, the theory of biological autonomy holds 
that a system is an agent if it is capable of interacting with its environment in such a way that its 
behavior is, first, enabled by its own constitutive organization and, second, contributing to maintain 
that very organization (Barandiaran et al. 2009; Arnellos and Moreno 2015; Moreno and Mossio 
2015). 
 The origins of the theory of autonomy can be traced back to Kant ( [1790]1987) and, more 
recently, to Varela (1979). A central leitmotif of older and more recent accounts of autonomy is the 
idea that it is not possible to adequately make sense of the nature and behavior of a living being by 
appealing only to mechanistic methods and  concepts, which consist of explaining a phenomenon in 
terms of the properties of—and interactions among—the constituents of the relevant system. Instead, 
the theory of autonomy submits that living beings possess a distinctive organization that, to use the  
famous Kantian formula ( [1790]1987), can be legitimately said to be "cause and effect of itself ." 
Thereby, living beings are (in Kant's terminology) self-organizing natural systems. In particular, and 
in contrast to mechanistic systems, the constituents o f self -organizing systems at the same time 
produce and are produced by the totality to which they belong. As a consequence, the explanatory 

 3 
relationship becomes circular: the properties of (and interactions among) the constituents account for 
the whole organization, and vice versa. 
 By relying on the circular organization of living beings, the theory of autonomy provides a 
naturalized ground for several concepts whose scientific legitimacy beyond the human domain is 
questioned, such as goals, norms, function, and, in particular, agency. Agency, therefore, is accounted 
for by means of a specific characterization of living  organization, which implies making it an 
inherently biological phenomenon. The theory of autonomy thereby attempts to bring back to the 
biological realm what has been neglected since the advent of the Darwinian theory of evolution by 
natural selection —a neglect reinforced by the Modern Synthesis during the 20th century (Walsh 
2015). 
 
 
Naturalizing Agency from the Perspective of Autonomy 
 
 According to the theory of autonomy, the mutual determination between the whole and its 
parts is the fundamental feature of a natural agent's constitutive organization, which notably 
differentiates living beings from artifacts  and machines. In the literature to which we refer, such 
feature is sometimes called autopoiesis1 (literally: self-production). Autopoiesis does not mean “self-
creation” in the sense of spontaneous generation, but instead reinterprets in contemporary terms what 
Kant ([1790]1987) labels “formative force” in his C ritique of Judgement . Living beings are 
autopoietic because the concerted activity of their parts results in their reciprocal continued 
production over time: consequently, the whole system is cause and effect of itself. Pace Kant, however, 
 
1  A canonical definition of autopoiesis reads as follows :  “An autopoietic machine is a machine organized (defined as a 
unity) as a network of processes of production (transformation and destruction) of components that produces the 
components which: (i) through their interactions and transformations continuously regenerate and realize the network of 
processes (relations) that produced them; and (ii) constitute it (the machine) as a concrete unity in the space in which they 
(the components) exist by specifying the topological domain of its realization as a network” (Maturana and Varela 1980, 
pp. 78–79). 

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no force is at play here: the organization of the parts is such that they collectively contribute to their 
own existence. 
  The self-determining nature of biological organization allows referring to purposiveness in a 
legitimate way: insofar as the effects of their activity contribute (at least in part) to determining their 
existence, the purpose of living beings is their own organization (Mossio and Bich 2017). Relatedly, 
the function of each part is to maintain the whole organization and, thereby, to maintain itself (Mossio 
et al. 2009). Un like other categories of purposive systems, such as artifacts and machines, which 
require an extrinsic purpose to be produced, living being are intrinsically purposive, given that the 
reason why they exist is...themselves (their own organization). Machines , in contrast, exist because 
they are means to achieve the goals of a third party ( which might be an individual animal or person, 
or a more complex socio-technical community). 
 The mutual dependence among the functional parts of a purposive organization is  usually 
referred to as “organizational closure” (Montévil and Mossio 2015). Organizational closure is a 
condition for the maintenance of the system because biological parts undergo degradation over time, 
and must therefore be repaired or replaced. As is often underscored in the theory of autonomy (Ruiz-
Mirazo and Moreno 2004), living beings are far-from-thermodynamic equilibrium systems, and their 
existence requires a continuous exchange of matter and energy with the environment, so as to feed 
the metaboli sm and re -establish the organization while “locally contravening” the second law of 
thermodynamics. 
 Insofar as organizational closure implies thermodynamic nonequilibrium, living beings as 
autonomous systems are not autarkic or independent but, rather, they must continuously interact with 
their surroundings. The interaction itself is controlled by functional parts and subsystems subject to 
organizational closure: hence, interactive capacities are themselves intrinsically purposive. Such 
purposive, function al interactive capacity performed by the living being realizing organizational 
closure is agency within the theory of autonomy (Barandiaran et al. 2009).  Agency, in other words, 
consists in the (inherent) interactive dimension of organizational closure, i n those functional 

 5 
capacities of a living being devoted to purposively governing the relationship with the environment. 
Examples of actions performed by agents are the pursuit of a bacterium by a neutrophil, the 
phototropism of a plant , and the foraging of a rabbit, insofar as they are interactive behaviors that 
contribute to the maintenance of the organization, which enables them. The theory of autonomy offers, 
therefore, a perspective from which agency can be understood as behavior perform ed for a reason, 
directed towards an intrinsic goal, which is the continued existence of the system’s self-determining 
organization, through an incessant interaction with its external environment. 
 The distinctive features of such a conception of agency are therefore threefold: non-intentional, 
intrinsic, and naturalized. First, agency is not necessarily related to intentionality and the mind, even 
though human-specific agency can, at least to some extent (but see below), be construed as a special 
case of n atural agency. Second, the purposiveness of agency is intrinsic, stemming from the 
organizational closure of living beings; it should then be distinguished from the extrinsic 
purposiveness of artifacts, which depends on the reference to an external designe r or constructor. In 
this respect, a crucial contribution of the theory of evolution by natural selection has been to provide 
a scientific alternative to a teleological explanation of biological phenomena appealing to a divine 
creator. Yet the theory of autonomy emphasizes the importance of the distinction between extrinsic 
and intrinsic purposiveness for biological and cognitive science: abandoning the first should not 
prevent the central role of the second from being acknowledged, especially with regard to the concept 
of agency. Third, while being associated to neither intentional nor extrinsic purposiveness, agency is 
conceived within the theory of autonomy in a fully naturalized way, as soon as the underlying causal 
regime—organizational closure—is deemed to meet the epistemological standards of natural science 
(a point that we take for granted here).   
 Construed as the interactive dimension of organizational closure, agency includes all 
behaviors performed towards the whole living being's overarching telos: its own preservation as a 
far-from-equilibrium organized system. Whatever their specific effect is, all functional organs and 
parts (and specifically those performing actions), are supposed to contribute to the intrinsic purpose 

 6 
of the organism as a whole. As we discuss below, however, this general stance requires qualification, 
because such a minimal agent is not yet an autonomous system, the concept that the theory employs 
to characterize a living being (which is, to a first approximation, an organism).2 The idea of biological 
autonomy calls for a more sophisticated conception of agency. 
 
 
Complexifying the Agent 
 
 If we were to stop at the characterization of agency given above, we would expose ourselves 
to the now classical criticism addressed by Di Paolo (2005) to the definition of autopoiesis by Varela 
and Maturana (1980, see footnote 1). According to Di Paolo, a pure autopoietic system is able to 
survive in a particular, stable environment by relying on its self -determining organization, but it is 
unable to adapt to changing conditions, a capacity that Di Paolo refers to as adaptivity. An adaptive 
system is a system that is able to undergo functional modifications so as to deal with internal or 
external perturbations .3  In turn, a n adaptive system is an adaptive agent if such modifications 
specifically affect its interactive capacities. Compared to minimal agency, adaptive agency involves 
more sophisticated skills, including higher-order regulation and anticipation, as well as the possibility 
to shift to different and new organizational regimes. As claimed by Moreno and Mossio (2015, Chap. 
4), an organizationally closed adaptive agent is an autonomous system and, thereby, a living system. 
As a matter of  fact all living systems, be the y unicellular or multicellular, meet ex hypothesi  the 
 
2While minimal agency appears to be necessary but not sufficient to characterize autonomy (and organismality), not every 
biological system is n ecessarily an agent. For instance, an ecosystem's organization might possibly be shown to realize 
closure and, thereby, be considered as a biological system (Nunes Neto et al. 2014); yet this would not necessarily imply 
that the ecosystem is also an agent.  We do not address these questions here, but it is important to keep in mind that 
concepts such as closure, agency, and autonomy are not only conceptually distinct, but they could also apply differently 
to various empirical cases. 
3Di Paolo's definition of adaptivity reads: “A system’s capacity, in some circumstances, to regulate its states and its relation 
to the environment with the result that, if the states are sufficiently close to the boundary of viability, tendencies are 
distinguished and acted upon depending on whether the states will approach or recede from the boundary and, as a 
consequence, tendencies of the first kind are moved closer to or transformed into tendencies of the second and so future 
states are prevented from reaching the boundary with an outward velocity” (2005, p. 438). 

 7 
characterization in terms of adaptive agents (including the examples given above) . 4 As Moreno and 
Mossio (2015, p. 104) point out, “Auto-nomy here is not just the maintenance of the current condition 
of existence, but the fact of promoting its own existence on behalf of a more fundamental (and less 
contingent) identity.” The identity of the system is less contingent because adaptive agency enables 
(continuously) changing its own current organization and behavior to keep existing. 
 One important implication of adaptive agency is that its realization leads to what is referred 
to as "sense-making" (Weber and Varela 2002, p. 18), i.e., the fact that the agent makes sense of i ts 
environment in relation to its intrinsic purposiveness. To mention a classical Varelian example,  
That sucrose is a nutrient isn’t intrinsic to the structure of the sucrose molecule; it’s a relational 
feature, linked to the bacterium’s metabolism. Sucrose has significance or value as food, but 
only in the milieu that the organism itself brings into existence. (Thompson 2004, p. 286)  
 
Thompson (2007) parallels Varela's sense -making with Uexküll's notion of the Umwelt (1934), 
elaborated in the context of his work on the perception of their environment by (human and nonhuman) 
animals. Another crucial implication is that an adaptive agent must be able to sense the environment, 
so as to detect changes and perturbations with respect to which an appr opriate action is performed  
(Moreno 2018).  
  The ability to make sense of one's environment can be understood as one of the first steps 
toward more complex forms of agency and cognition. In the theory of autonomy, the question whether 
there is a difference between agency and cognition is the object of an ongoing debate, notably within 
enactivism (Bourgine and Stewart 2004; Di Paolo et al. 2017; see also Gambarotto and Mossio 2022). 
According to one particular position, cognition is qualitatively different from agency insofar as it 
designates behavioral and interactive capacities whose purpose goes beyond the fundamental one, i.e., 
the preservation of its own existence. One can deal with this issue from an evolutionary perspective 
 
4  There is a debate within the theory of autonomy about whether, insofar as virtually all existing living systems are 
adaptive agents, only adaptive agency should count as genuine agency (see Moreno 2018 for a discussion). Here, we do 
not take a position on this debate, and we limit ourself to not ing that 1) minimal agency has the merit of pinpointing the 
fundamental features of the concept (notably those discussed by Barandiaran et al. 2009) and 2) it may be that minimal 
and adaptive agency can be separated empirically, for example in the context of investigations into the origins of life.  

 8 
and argue that, starting from the general sense-making capacity of agents, more complex skills have 
emerged little by little, up to the realization of the cognitive systems that we know today. In addition, 
the theory of autonomy also looks at the relationship between agency and evolution the other way 
around, by exploring how agents shape evolution through their reciprocal interactions and their 
influence on the environment ( Walsh 2015; Sultan et al. 2022). Such a perspective on the complex 
relations between agency, cognition, and evolution participates in a trend, which has brought into the 
spotlight phenomena that seemed to be underestimated by the Modern Synthesis, such as niche 
construction and developmental plasticity, and which puts the organism as an agent at the center stage 
(Lewontin 1985; West-Eberhard 2003; Bateson 2005; Laland et al. 2014; Sultan 2015). The theory of 
autonomy makes an original contribution to structuring this trend, thanks to the organizational rooting 
of biological agency and cognition on which it relies.   
 Yet the evolutionary continuity between agency and cognition should not overlook their 
organizational discontinuity. As mentioned, the theory of autonomy grounds the purposiveness of 
adaptive agency, enhanced with sense-making, in terms of the contribution to the intrinsic telos, which 
is an organized system's own existence. Given that intrinsic purposiveness is by definition construed 
as a circular relation between the existence and the activity of a system, it follows that any function 
or action performed by an autonomous system is purposive insofar as it contributes to determining 
its conditions of existence. However, the philosophical problem raised by cognition is that there seems 
indeed to exist a kind of purposive behavior that, prima facie, do es not contribute to an agent's own 
survival. Different strategies can be envisioned to deal with this issue, and we do not discuss them 
here.5 The main philosophical choice seems to consist in either arguing that purposiveness does not 
need to be anchore d to an intrinsic telos, or that any purposeful behavior can be shown, in fine, to 
contribute to the existence of a self -determining system. Whatever the choice, what is at stake is an 
adequate understanding of the connection and difference between surviving and living. 
 
5As a matter of fact, the same kind of problem applies to reproduction, which seems also to be a biological phenomenon 
in which purposeful behavior does not contribute to  the preservation of the agent itself. Advocates of the theory of 
autonomy have dealt with reproduction in previous publications (see Saborido et al. 2011; Mossio and Pontarotti 2019). 

 9 
 To conclude, the theory of autonomy provides an understanding of agency as a biological 
phenomenon, grounded in the self-determining purposeful organization of living beings. In particular, 
agency designates the functional capacities devoted to governing the interaction of the organism with 
the external environment (which of course includes other living beings). Agency, and in particular 
adaptive agency, is one of the central dimensions of the overarching idea of biological autonomy. The 
understanding of agency from the perspective of autonomy possesses some crucial strengths and faces 
interesting challenges. Among the latter, we have mentioned the complex relationships between 
agency and evolution, as well those between agency and cognition.  We look forward to seeing how 
the theory of autonomy will take up such challenges in the future. In particular, the project of 
elaborating an account of the transition between agency and cognition requires dealing with the role 
played by the nervous syste m and the brain in enabling the emergence of more sophisticated 
purposive behavior (Barandiaran and Moreno 2006). In turn, this opens the way to a biologically 
grounded account of the mind (Thompson 2007; Di Paolo et al. 2017) and, possibly, to establishing a 
connection with the conceptions of agency appealing to intentionality and mental states. 
 
Declarations 
Competing interests  
The authors have no relevant financial or nonfinancial interests to disclose. 
 
Funding 
Funding for this research was provided by the CNRS —University of Toronto “PhD Mobility Joint 
Program” (PhD Fellowship to Louis Virenque).  
 
 
 
 

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